Two-dimensional vibrational optical probes for peptide fast folding investigation.
نویسندگان
چکیده
A simulation study shows that early protein folding events may be investigated by using a recently developed family of nonlinear infrared techniques that combine the high temporal and spatial resolution of multidimensional spectroscopy with the chirality-specific sensitivity of amide vibrations to structure. We demonstrate how the structural sensitivity of cross-peaks in two-dimensional correlation plots of chiral signals of an alpha helix and a beta hairpin may be used to clearly resolve structural and dynamical details undetectable by one-dimensional techniques (e.g. circular dichroism) and identify structures indistinguishable by NMR.
منابع مشابه
Mapping fast protein folding with multiple-site fluorescent probes.
Fast protein folding involves complex dynamics in many degrees of freedom, yet microsecond folding experiments provide only low-resolution structural information. We enhance the structural resolution of the five-helix bundle protein λ6-85 by engineering into it three fluorescent tryptophan-tyrosine contact probes. The probes report on distances between three different helix pairs: 1-2, 1-3, and...
متن کاملTime-resolved infrared spectroscopy of RNA folding.
We introduce time-resolved infrared spectroscopy as a powerful method to study the kinetics of RNA folding and unfolding transitions. A laser-induced temperature jump is used to initiate a perturbation in the RNA structure. A probe laser, tuned to a specific infrared absorption of the RNA, is then used to monitor the subsequent relaxation kinetics. A 10-ns pump pulse permits the investigation o...
متن کاملInvestigation of Structural and Optoelectronic Properties of Sc2O3 Nanoclusters: A DFT Study
In this manuscript, density functional theory was used to explore structural, vibrational and optical properties of the (Sc2O3)n (n=1-5) cluster systems using DFT/B3LYP/LanL2DZ level of computation. Different stable isomers were obtained and numerous chemical parameters such as HOMO-LUMO gap, ionization potential and electron affinity were calculated successfully. Stability of the clusters was ...
متن کاملSpectroscopy, Structural, and Optical Investigations of NiFe2O4 Ferrite
Ni ferrite crystalline material is synthesized using a sol-gel method at two different temperatures. The vibrational and stretching modes, crystalline phase, size distribution and morphology of the products are investigated via Raman back-scattering and Fourier transform infrared (FTIR) spectroscopy, XRD and FESEM, respectively. Vibrational modes of spinel ferrite are observed at Raman and FTIR...
متن کاملCoherent Anti-Stokes Raman Scattering Microscopy: Instrumentation, Theory, and Applications
Coherent anti-Stokes Raman scattering (CARS) microscopy permits vibrational imaging with high-sensitivity, high speed, and three-dimensional spatial resolution. We review recent advances in CARS microscopy, including experimental design, theoretical understanding of contrast mechanisms, and applications to chemical and biological systems. We also review the development of multiplex CARS microsp...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Proceedings of the National Academy of Sciences of the United States of America
دوره 103 50 شماره
صفحات -
تاریخ انتشار 2006